The release of Zoids VS II brought about several improvements to the game, including better landscape graphics, more Zoids, and a new user-interface. It also featured the new fist mode, engaging players at close-quarters combat. Released in Japan on September 4, 2003. The game included a variety of pilots, Zoids, weapons, and parts. Over 50 pilots were available to play as, including characters from Zoids: New Century and Chaotic Century. A large number of Zoids were included in the game including more than 60 Zoids and secret unlockable Zoids. By using a memory card containing data from the original Zoids VS, a Shield Liger DCS-J was available in the shop, which was otherwise unusable.

Zoids Battle Legends
The English dub of Zoids VS II, it featured a complete translation of the other game, albeit with a few errors. Brad is named "Ballad," Thomas is called "Thoma", Blood is named "Brad", etc.